Phylogenetic relationships among Mahseers (Cyprindae) in Malaysia inferred from Sequencing of a cytochrome c oxidase I (COI) Mitochondrial DNA (mtDNA) segment

The present study examines the phylogenetic relationships among Tor douronensis, T. tambra, T. tambroides of the genus Tor and Neolissochilus stracheyi representing the genus Neolissochilus, by using the partial sequencing of the mitochondrial DNA cytochrome c oxidase I (COD gene. Samples were co...

Full description

Bibliographic Details
Main Authors:	Esa, Yuzine, Kamarudin, Kamarul Rahim, Japning, Jeffrine Rovie Ryon, A. Rahim, Khairul Adha, Daud, Siti Khalijah, Siraj, Siti Shapor, Tan, Soon Guan
Format:	Conference or Workshop Item
Language:	English
Published:	2007
Subjects:	QL Zoology
Online Access:	http://irep.iium.edu.my/13006/ http://irep.iium.edu.my/13006/ http://irep.iium.edu.my/13006/1/Kamarul.pdf

id	iium-13006
recordtype	eprints
spelling	iium-130062013-07-03T08:59:00Z http://irep.iium.edu.my/13006/ Phylogenetic relationships among Mahseers (Cyprindae) in Malaysia inferred from Sequencing of a cytochrome c oxidase I (COI) Mitochondrial DNA (mtDNA) segment Esa, Yuzine Kamarudin, Kamarul Rahim Japning, Jeffrine Rovie Ryon A. Rahim, Khairul Adha Daud, Siti Khalijah Siraj, Siti Shapor Tan, Soon Guan QL Zoology The present study examines the phylogenetic relationships among Tor douronensis, T. tambra, T. tambroides of the genus Tor and Neolissochilus stracheyi representing the genus Neolissochilus, by using the partial sequencing of the mitochondrial DNA cytochrome c oxidase I (COD gene. Samples were collected from various rivers throughout Sarawak, Sabah and Peninsular Malaysia. The phylogenetic analysis obtained by using the Neighbour Joining (NI) and Maximum Parsimony (MP) procedures supported the monophyletic status among the three mahseers, except between T. tambroides and T. tambra. The high genetic divergence separating T. douronensis and T. tambroides or T. tambra confirmed their status as distinct species. Likewise, the high genetic divergence separating the N. stracheyi lineage from the Tor lineages (7.3-L1.0%) also supported its recent reclassification from the genus Tor rnto the genus Neolissochilus. The identical haplotypes found between all the T. tambra sequences with most of the T. tambroides sequences indicated a very close genetic relationship between them. Similarly, the close genetic relationships (0-0.a%) found between T. tambroides samples from Peninsular Malaysia (kelah fish) and those from Sarawak (empurau fish) supported their taxonomic status as belonging to the same species. Phylogenetic analysis also revealed that the T. douronenszs mtDNA consisted of three highly distinct lineages (Sabah, northern and southern Sarawak), consistent with their geographical locations. However, our phylogenetic analysis did not find any T. douronensls group to be genetically more similar to T. tambroides (6.3-9.2%). Overall, the present study managed to provide useful insights into the phylogeny and taxonomy of the mahseers in Malaysia 2007-05-05 Conference or Workshop Item PeerReviewed application/pdf en http://irep.iium.edu.my/13006/1/Kamarul.pdf Esa, Yuzine and Kamarudin, Kamarul Rahim and Japning, Jeffrine Rovie Ryon and A. Rahim, Khairul Adha and Daud, Siti Khalijah and Siraj, Siti Shapor and Tan, Soon Guan (2007) Phylogenetic relationships among Mahseers (Cyprindae) in Malaysia inferred from Sequencing of a cytochrome c oxidase I (COI) Mitochondrial DNA (mtDNA) segment. In: 7th National Congress on Genetics, 5-7 May 2007, Kota Bharu, Kelantan, Malaysia. http://www.persatuangenetikmalaysia.com/index_files/Page36561.html
repository_type	Digital Repository
institution_category	Local University
institution	International Islamic University Malaysia
building	IIUM Repository
collection	Online Access
language	English
topic	QL Zoology
spellingShingle	QL Zoology Esa, Yuzine Kamarudin, Kamarul Rahim Japning, Jeffrine Rovie Ryon A. Rahim, Khairul Adha Daud, Siti Khalijah Siraj, Siti Shapor Tan, Soon Guan Phylogenetic relationships among Mahseers (Cyprindae) in Malaysia inferred from Sequencing of a cytochrome c oxidase I (COI) Mitochondrial DNA (mtDNA) segment
description	The present study examines the phylogenetic relationships among Tor douronensis, T. tambra, T. tambroides of the genus Tor and Neolissochilus stracheyi representing the genus Neolissochilus, by using the partial sequencing of the mitochondrial DNA cytochrome c oxidase I (COD gene. Samples were collected from various rivers throughout Sarawak, Sabah and Peninsular Malaysia. The phylogenetic analysis obtained by using the Neighbour Joining (NI) and Maximum Parsimony (MP) procedures supported the monophyletic status among the three mahseers, except between T. tambroides and T. tambra. The high genetic divergence separating T. douronensis and T. tambroides or T. tambra confirmed their status as distinct species. Likewise, the high genetic divergence separating the N. stracheyi lineage from the Tor lineages (7.3-L1.0%) also supported its recent reclassification from the genus Tor rnto the genus Neolissochilus. The identical haplotypes found between all the T. tambra sequences with most of the T. tambroides sequences indicated a very close genetic relationship between them. Similarly, the close genetic relationships (0-0.a%) found between T. tambroides samples from Peninsular Malaysia (kelah fish) and those from Sarawak (empurau fish) supported their taxonomic status as belonging to the same species. Phylogenetic analysis also revealed that the T. douronenszs mtDNA consisted of three highly distinct lineages (Sabah, northern and southern Sarawak), consistent with their geographical locations. However, our phylogenetic analysis did not find any T. douronensls group to be genetically more similar to T. tambroides (6.3-9.2%). Overall, the present study managed to provide useful insights into the phylogeny and taxonomy of the mahseers in Malaysia
format	Conference or Workshop Item
author	Esa, Yuzine Kamarudin, Kamarul Rahim Japning, Jeffrine Rovie Ryon A. Rahim, Khairul Adha Daud, Siti Khalijah Siraj, Siti Shapor Tan, Soon Guan
author_facet	Esa, Yuzine Kamarudin, Kamarul Rahim Japning, Jeffrine Rovie Ryon A. Rahim, Khairul Adha Daud, Siti Khalijah Siraj, Siti Shapor Tan, Soon Guan
author_sort	Esa, Yuzine
title	Phylogenetic relationships among Mahseers (Cyprindae) in Malaysia inferred from Sequencing of a cytochrome c oxidase I (COI) Mitochondrial DNA (mtDNA) segment
title_short	Phylogenetic relationships among Mahseers (Cyprindae) in Malaysia inferred from Sequencing of a cytochrome c oxidase I (COI) Mitochondrial DNA (mtDNA) segment
title_full	Phylogenetic relationships among Mahseers (Cyprindae) in Malaysia inferred from Sequencing of a cytochrome c oxidase I (COI) Mitochondrial DNA (mtDNA) segment
title_fullStr	Phylogenetic relationships among Mahseers (Cyprindae) in Malaysia inferred from Sequencing of a cytochrome c oxidase I (COI) Mitochondrial DNA (mtDNA) segment
title_full_unstemmed	Phylogenetic relationships among Mahseers (Cyprindae) in Malaysia inferred from Sequencing of a cytochrome c oxidase I (COI) Mitochondrial DNA (mtDNA) segment
title_sort	phylogenetic relationships among mahseers (cyprindae) in malaysia inferred from sequencing of a cytochrome c oxidase i (coi) mitochondrial dna (mtdna) segment
publishDate	2007
url	http://irep.iium.edu.my/13006/ http://irep.iium.edu.my/13006/ http://irep.iium.edu.my/13006/1/Kamarul.pdf
first_indexed	2023-09-18T20:22:08Z
last_indexed	2023-09-18T20:22:08Z
_version_	1777408177718951936

Phylogenetic relationships among Mahseers (Cyprindae) in Malaysia inferred from Sequencing of a cytochrome c oxidase I (COI) Mitochondrial DNA (mtDNA) segment

Similar Items